Bonsai: A GPU Tree-Code

نویسندگان

  • Jeroen Bédorf
  • Evghenii Gaburov
  • Simon Portegies Zwart
چکیده

We present a gravitational hierarchical N-body code that is designed to run efficiently on Graphics Processing Units (GPUs). All parts of the algorithm are exectued on the GPU which eliminates the need for data transfer between the Central Processing Unit (CPU) and the GPU. Our tests indicate that the gravitational tree-code outperforms tuned CPU code for all parts of the algorithm and show an overall performance improvement of more than a factor 20, resulting in a processing rate of more than 2.8 million particles per second.

برای دانلود رایگان متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

Resource-efficient Machine Learning in 2 KB RAM for the Internet of Things

This paper develops a novel tree-based algorithm, called Bonsai, for efficient prediction on IoT devices – such as those based on the Arduino Uno board having an 8 bit ATmega328P microcontroller operating at 16 MHz with no native floating point support, 2 KB RAM and 32 KB read-only flash. Bonsai maintains prediction accuracy while minimizing model size and prediction costs by: (a) developing a ...

متن کامل

Accelerating high-order WENO schemes using two heterogeneous GPUs

A double-GPU code is developed to accelerate WENO schemes. The test problem is a compressible viscous flow. The convective terms are discretized using third- to ninth-order WENO schemes and the viscous terms are discretized by the standard fourth-order central scheme. The code written in CUDA programming language is developed by modifying a single-GPU code. The OpenMP library is used for parall...

متن کامل

GAMER: a GPU-Accelerated Adaptive Mesh Refinement Code for Astrophysics

We present the newly developed code, GAMER (GPU-accelerated Adaptive MEsh Refinement code), which has adopted a novel approach to improve the performance of adaptive mesh refinement (AMR) astrophysical simulations by a large factor with the use of the graphic processing unit (GPU). The AMR implementation is based on a hierarchy of grid patches with an oct-tree data structure. We adopt a three-d...

متن کامل

BONSAI Garden: Parallel Knowledge Discovery System for Amino Acid Sequences

We have developed a machine discovery system BONSAI which receives positive and negative examples as inputs and produces as a hypothesis a pair of a decision tree over regular patterns and an alphabet indexing. This system has succeeded in discovering reasonable knowledge on transmembrane domain sequences and signal peptide sequences by computer experiments. However, when several kinds of seque...

متن کامل

Bonsai: Nature in Miniature

The 1914 Arnold Arboretum expedition to Japan led by Ernest H. Wilson produced, among other things, some excellent photographs which clearly show the natural inspiration for many of the forms of bonsai that most specialized kind of Japanese horticulture. Pictures such as these can help put the hobbyist in touch with the source of his art and can be of particular importance to bonsai enthusiasts...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

عنوان ژورنال:
  • CoRR

دوره abs/1204.2280  شماره 

صفحات  -

تاریخ انتشار 2012